Email this article 
Hide
Show all
| Authors: | Thomas J. Hoffmann | ||||
| Title: | Passing in Command Line Arguments and Parallel Cluster/Multicore Batching in R with batch | ||||
| Abstract: | It is often useful to rerun a command line R script with some slight change in the parameters used to run it - a new set of parameters for a simulation, a different dataset to process, etc. The R package batch provides a means to pass in multiple command line options, including vectors of values in the usual R format, easily into R. The same script can be setup to run things in parallel via different command line arguments. The R package batch also provides a means to simplify this parallel batching by allowing one to use R and an R-like syntax for arguments to spread a script across a cluster or local multicore/multiprocessor computer, with automated syntax for several popular cluster types. Finally it provides a means to aggregate the results together of multiple processes run on a cluster. | ||||
|
Page views:: 8040. Submitted: 2009-12-16. Published: 2011-03-01. |
|||||
| Paper: |
Passing in Command Line Arguments and Parallel Cluster/Multicore Batching in R with batch
Download PDF
(Downloads: 8405)
|
||||
| Supplements: |
| ||||
| DOI: |
10.18637/jss.v039.c01
|
This work is licensed under the licenses Paper: Creative Commons Attribution 3.0 Unported License Code: GNU General Public License (at least one of version 2 or version 3) or a GPL-compatible license. |