stan::mcmc::softabs_metric< Model, BaseRNG > Class Template Reference

#include <softabs_metric.hpp>

Inheritance diagram for stan::mcmc::softabs_metric< Model, BaseRNG >:

Public Member Functions
	softabs_metric (const Model &model)
double	T (softabs_point &z)
double	tau (softabs_point &z)
double	phi (softabs_point &z)
double	dG_dt (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
Eigen::VectorXd	dtau_dq (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
Eigen::VectorXd	dtau_dp (softabs_point &z)
Eigen::VectorXd	dphi_dq (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	sample_p (softabs_point &z, BaseRNG &rng)
void	init (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_metric (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_metric_gradient (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_gradients (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
Public Member Functions inherited from stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >
	base_hamiltonian (const Model &model)
	~base_hamiltonian ()
double	V (softabs_point &z)
double	H (softabs_point &z)
void	init (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_potential (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_potential_gradient (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_metric (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_metric_gradient (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)
void	update_gradients (softabs_point &z, interface_callbacks::writer::base_writer &info_writer, interface_callbacks::writer::base_writer &error_writer)

Static Public Attributes
static double	lower_softabs_thresh = 1e-4
static double	upper_softabs_thresh = 18
static double	jacobian_thresh = 1e-10

Additional Inherited Members
Public Types inherited from stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >
typedef softabs_point	PointType
Protected Member Functions inherited from stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >
void	write_error_msg_ (const std::exception &e, interface_callbacks::writer::base_writer &writer)
Protected Attributes inherited from stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >
const Model &	model_

Detailed Description

template<class Model, class BaseRNG>
class stan::mcmc::softabs_metric< Model, BaseRNG >

Definition at line 28 of file softabs_metric.hpp.

Constructor & Destructor Documentation

softabs_metric()

template<class Model , class BaseRNG >

stan::mcmc::softabs_metric< Model, BaseRNG >::softabs_metric ( const Model &  model )

inlineexplicit

Definition at line 33 of file softabs_metric.hpp.

Member Function Documentation

dG_dt()

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::dG_dt ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 49 of file softabs_metric.hpp.

dphi_dq()

template<class Model , class BaseRNG >

Eigen::VectorXd stan::mcmc::softabs_metric< Model, BaseRNG >::dphi_dq ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 81 of file softabs_metric.hpp.

dtau_dp()

template<class Model , class BaseRNG >

Eigen::VectorXd stan::mcmc::softabs_metric< Model, BaseRNG >::dtau_dp ( softabs_point &  z )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 75 of file softabs_metric.hpp.

dtau_dq()

template<class Model , class BaseRNG >

Eigen::VectorXd stan::mcmc::softabs_metric< Model, BaseRNG >::dtau_dq ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 57 of file softabs_metric.hpp.

init()

template<class Model , class BaseRNG >

void stan::mcmc::softabs_metric< Model, BaseRNG >::init ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inline

Definition at line 109 of file softabs_metric.hpp.

phi()

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::phi ( softabs_point &  z )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 45 of file softabs_metric.hpp.

sample_p()

template<class Model , class BaseRNG >

void stan::mcmc::softabs_metric< Model, BaseRNG >::sample_p ( softabs_point &  z, BaseRNG &  rng  )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 97 of file softabs_metric.hpp.

T()

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::T ( softabs_point &  z )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 36 of file softabs_metric.hpp.

tau()

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::tau ( softabs_point &  z )

inlinevirtual

Implements stan::mcmc::base_hamiltonian< Model, softabs_point, BaseRNG >.

Definition at line 40 of file softabs_metric.hpp.

update_gradients()

template<class Model , class BaseRNG >

void stan::mcmc::softabs_metric< Model, BaseRNG >::update_gradients ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inline

Definition at line 196 of file softabs_metric.hpp.

update_metric()

template<class Model , class BaseRNG >

void stan::mcmc::softabs_metric< Model, BaseRNG >::update_metric ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inline

Definition at line 117 of file softabs_metric.hpp.

update_metric_gradient()

template<class Model , class BaseRNG >

void stan::mcmc::softabs_metric< Model, BaseRNG >::update_metric_gradient ( softabs_point &  z, interface_callbacks::writer::base_writer &  info_writer, interface_callbacks::writer::base_writer &  error_writer  )

inline

Definition at line 161 of file softabs_metric.hpp.

Member Data Documentation

jacobian_thresh

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::jacobian_thresh = 1e-10

static

Definition at line 214 of file softabs_metric.hpp.

lower_softabs_thresh

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::lower_softabs_thresh = 1e-4

static

Definition at line 205 of file softabs_metric.hpp.

upper_softabs_thresh

template<class Model , class BaseRNG >

double stan::mcmc::softabs_metric< Model, BaseRNG >::upper_softabs_thresh = 18

static

Definition at line 209 of file softabs_metric.hpp.

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The documentation for this class was generated from the following file:

• src/stan/mcmc/hmc/hamiltonians/softabs_metric.hpp